The doGetAsPlainText method defaults to the MIMEmedia type of the @Produces annotation at the classlevel. The doGetAsHtml method’s @Produces annotationoverrides the class-level @Produces setting, and specifiesthat the method can produce HTML rather than plain text. The following list contains the standard types that are supported automaticallyfor entities. You only need to write an entity provider if you are not choosingone of the following, standard types. Thebehavior of a resource is determined by the HTTP methods (typically, GET, POST, PUT, DELETE) to which the resource is responding. The @Path annotation identifiesthe URI path template to which the resource responds, and is specified atthe class level of a resource.
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Open APIs, also known as public APIs, are application programming interfaces that are publicly accessible on the internet and are available for developers to use. These web scraping platforms are typically made available by companies, organizations, or individuals to allow external developers to interact with their services, data, or platforms. Open APIs are generally free to use (although some may have usage limits or tiered pricing) and can help developers integrate functionality, access data, or build applications that interact with various systems. These tools are widely accessible and provide great resources for developers, hobbyists, and small businesses. Taking some important cell types (such as T cell and other “common-sense” cell types) as roots, the subtrees were thus extracted from the Cell Ontology. Similar to cell subtrees, we extracted the subtrees from the Uber-anatomy ontology with “common-sense” tissues (e.g., brain, liver) as the roots and only kept the tissues mentioned in unified cell marker entries.
Free web scrapers are also a great option, offering features for small-scale projects and learning – we have compiled a list of best websites to scrape that can be used together with the scrapers. Both options of scrapers mentioned provide an accessible way to start web scraping efficiently and step by step move to larger, more difficult projects and software. Manual inspection and correction of originally incorrectly annotated clusters across five datasets. The major-cell-type catalog used for mapping cell types to a unified level. For all three case studies, expression data together with cell labels (if available) were downloaded from public repositories and then processed using Seurat (v4.2.0) with default parameters.
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